HalophFGD

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Basic Information
Locus ID: gene-QOZ80_7AG0580130
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: protein dimerization activity
Maps and Mapping Data
Chromosome Start End Strand ID
chr7A 46386839 46389106 + gene-QOZ80_7AG0580130
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.71 53,675.85 Da 51.41 81.30 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 7 46 3.3E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 76 3.27E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 50 5.6E-5 -
ProSiteProfiles PS50181 F-box domain profile. 5 52 8.623154 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025801267.1 uncharacterized protein LOC112880731 isoform X3 [Panicum hallii] 0
TrEMBL A0A0A9MQ50 F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH02.1933, CH02.1946
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_4BG0352940, gene-QOZ80_6AG0533510 ...
gene-QOZ80_6BG0486540, gene-QOZ80_7AG0580130, gene-QOZ80_7BG0611230
Poaceae Lolium multiflorum 4 gene-QYE76_008233, gene-QYE76_008236, gene-QYE76_008837 ...
gene-QYE76_044561
Poaceae Oryza coarctata 2 Oco01G010670, Oco01G011070
Poaceae Oryza sativa 2 LOC_Os01g28520.1, LOC_Os01g32640.1
Poaceae Paspalum vaginatum 1 gene-BS78_02G371000
Poaceae Puccinellia tenuiflora 2 Pt_Chr0500709, Pt_Chr0704898
Poaceae Sporobolus alterniflorus 4 Chr19G000930, Chr25G013870, Chr25G013880, Chr27G016500
Poaceae Thinopyrum elongatum 3 Tel1E01G069100, Tel1E01G099600, Tel1E01G744700
Poaceae Triticum aestivum 8 TraesCS1A02G439200.1, TraesCS1B02G055300.1 ...
TraesCS1B02G474400.1, TraesCS1B02G474600.1, TraesCS1D02G032100.1, TraesCS1D02G048100.1, TraesCS1D02G448100.2, TraesCS6D02G114000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.