Basic Information
Locus ID:
gene-QOZ80_7AG0574230
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 42074044 | 42078404 | + | gene-QOZ80_7AG0574230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 50,357.24 Da | 35.25 | 80.51 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 368 | 439 | 3.2E-16 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 30 | 351 | 7.3E-72 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 30 | 351 | 1.52E-75 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 365 | 457 | 3.2E-8 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 29 | 356 | 1.6E-109 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 1.5E-40 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021308936.1 | glucan endo-1,3-beta-glucosidase 4 [Sorghum bicolor] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811N0T3 | X8 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS11477 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology