Basic Information
Locus ID:
gene-QOZ80_7AG0568820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 34821969 | 34822529 | + | gene-QOZ80_7AG0568820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 20,782.44 Da | 62.63 | 76.08 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 158 | 5.85008E-29 | IPR002083 |
| Pfam | PF00917 | MATH domain | 48 | 157 | 2.3E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 162 | 9.81E-37 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 162 | 4.2E-32 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 158 | 21.00461 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052168972.1 | BTB/POZ and MATH domain-containing protein 3-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A5J9V3Y8 | Speckle-type POZ protein-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_22266 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0568820, gene-QOZ80_9AG0683000 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0088540.1.CDS1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_060368, gene-QYE76_060374, gene-QYE76_060376 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G653400, Tel1E01G659000 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC1AG058850, gene_TRIDC1AG058870 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G428200.1.cds1, TraesCS1B02G428300.1.cds1 ... |