Basic Information
Locus ID:
gene-QOZ80_7AG0565040
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 27181846 | 27186515 | + | gene-QOZ80_7AG0565040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 36,450.63 Da | 59.69 | 70.91 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 183 | 320 | 1.3E-31 | IPR006571 |
| SMART | SM00584 | 109ultra | 157 | 321 | 2.8E-32 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 158 | 321 | 26.377403 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 123 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_025804371.1 | TLD domain-containing protein 2 isoform X1 [Panicum hallii] | 0 |
| A8KBE0 | Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3GXP5 | TLDc domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G114800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology