Basic Information
Locus ID:
gene-QOZ80_7AG0557450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 5482000 | 5488430 | + | gene-QOZ80_7AG0557450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 156,155.20 Da | 38.57 | 69.12 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 941 | 1001 | 0.00198683 | - |
| CDD | cd15532 | PHD2_CHD_II | 751 | 789 | 6.11876E-17 | - |
| Pfam | PF00628 | PHD-finger | 751 | 791 | 1.2E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 673 | 723 | 5.3E-18 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 740 | 794 | 3.29E-13 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 936 | 1022 | 1.66E-6 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 739 | 822 | 8.7E-16 | IPR013083 |
| SMART | SM00249 | PHD_3 | 750 | 790 | 1.5E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 791 | 846 | 15.0 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 897 | 1048 | 9.42258 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 748 | 792 | 9.1073 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1400 | 1424 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14920.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. | 0 |
| RefSeq | XP_039793540.1 | increased DNA methylation 1-like isoform X1 [Panicum virgatum] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W0M9 | PHD-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15208 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology