Basic Information
Locus ID:
gene-QOZ80_7AG0556150
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 4266325 | 4272034 | + | gene-QOZ80_7AG0556150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 98,316.49 Da | 44.74 | 79.63 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 728 | 880 | 3.51474E-64 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 258 | 879 | 3.0E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 256 | 881 | 3.14E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 248 | 476 | 5.4E-65 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 692 | 882 | 5.4E-57 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 258 | 882 | 54.794914 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 259 | 274 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 824 | 841 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 637 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_034581952.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Setaria viridis] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6VLG6 | Ubiquitin carboxyl-terminal hydrolase OS=Setaria viridis OX=4556 GN=SEVIR_2G042700v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology