Basic Information
Locus ID:
gene-QOZ80_7AG0554960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 2943053 | 2952903 | - | gene-QOZ80_7AG0554960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 123,237.07 Da | 44.21 | 84.03 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 703 | 840 | 9.37534E-14 | IPR002083 |
| CDD | cd00121 | MATH | 20 | 157 | 9.14188E-6 | IPR002083 |
| CDD | cd00121 | MATH | 477 | 612 | 2.42406E-13 | IPR002083 |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 610 | 676 | 5.61746E-16 | - |
| Pfam | PF00651 | BTB/POZ domain | 240 | 355 | 7.7E-22 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 621 | 678 | 4.7E-13 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 919 | 1015 | 1.4E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 619 | 677 | 1.34E-15 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 478 | 618 | 1.1E-16 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 161 | 4.58E-13 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 919 | 1017 | 2.36E-21 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 698 | 845 | 2.29E-19 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 224 | 357 | 4.71E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 1020 | 1090 | 7.0E-11 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 476 | 611 | 4.1E-16 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 160 | 4.1E-12 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 700 | 843 | 2.6E-19 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 359 | 430 | 2.3E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 217 | 358 | 1.1E-32 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 918 | 1019 | 9.6E-23 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 612 | 699 | 1.1E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 247 | 357 | 3.1E-25 | IPR000210 |
| SMART | SM00225 | BTB_4 | 915 | 1018 | 8.2E-18 | IPR000210 |
| SMART | SM00225 | BTB_4 | 610 | 706 | 0.074 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 696 | 839 | 14.535526 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 475 | 612 | 13.026926 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 610 | 676 | 15.576591 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 915 | 983 | 14.583856 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 247 | 319 | 18.472071 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 890 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 861 | 890 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025800261.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W114 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14488 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0554960, gene-QOZ80_7BG0586030 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr24G001820 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-53944 |