HalophFGD

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Basic Information
Locus ID: gene-QOZ80_7AG0554950
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Speckle-type POZ protein-like protein
Maps and Mapping Data
Chromosome/Scaffold Start End Strand ID
chr7A 2935925 2936533 - gene-QOZ80_7AG0554950
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.18 21,933.06 Da 38.21 90.15 0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 3 129 5.50621E-8 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 4 136 9.97E-13 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 134 2.0E-12 IPR008974
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025800271.1 BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] 0
TrEMBL A0A5J9SV12 BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_51685 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_7AG0554940, gene-QOZ80_7AG0554950 ...
gene-QOZ80_7AG0554990, gene-QOZ80_7BG0586000, gene-QOZ80_7BG0586010, gene-QOZ80_9AG0681210
Poaceae Oryza coarctata 1 Oco07G002020
Poaceae Oryza sativa 1 LOC_Os04g18830.1
Poaceae Paspalum vaginatum 1 gene-BS78_02G028500
Poaceae Sporobolus alterniflorus 2 Chr24G001810, Chr28G000690
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.