Basic Information
Locus ID:
gene-QOZ80_7AG0554940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7A | 2929036 | 2930175 | - | gene-QOZ80_7AG0554940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 42,051.19 Da | 36.53 | 88.52 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 24 | 137 | 4.95417E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 173 | 285 | 4.1E-21 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 11 | 143 | 3.43E-18 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 165 | 314 | 3.66E-27 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 288 | 357 | 1.6E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 7 | 140 | 9.3E-17 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 163 | 287 | 4.5E-29 | IPR011333 |
| SMART | SM00225 | BTB_4 | 181 | 286 | 1.1E-17 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 6 | 137 | 10.674532 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 181 | 248 | 16.38319 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_004958935.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VXN3 | Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14487 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_7AG0554940, gene-QOZ80_7AG0554950 ... |
| Poaceae | Oryza coarctata | 1 | Oco07G002020 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g18830.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G028500 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G001810, Chr28G000690 |