halophFGD

Basic Information

Locus ID: gene-QOZ80_7AG0554490

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Caleosin related protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7A	2262505	2263593	+	gene-QOZ80_7AG0554490

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.24	40,796.48 Da	53.71	94.81	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	8	52	1.41E-7	IPR036047
SUPERFAMILY	SSF52058	L domain-like	155	332	4.08E-5	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K17991 (peroxygenase [EC:1.11.2.3])

Pathway:

ko00073 (Cutin, suberine and wax biosynthesis) map00073 (Cutin, suberine and wax biosynthesis)

Reaction:

R09462 ((9Z)-Octadecenoic acid + Lipid hydroperoxide <=> 9,10-Epoxystearate + Alcohol) R09463 (18-Hydroxyoleate + Lipid hydroperoxide <=> 9,10-Epoxy-18-hydroxystearate + Alcohol)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_052146549.1	uncharacterized protein LOC127765649 [Oryza glaberrima]	0
TrEMBL	A0A5J9VWP0	F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14322 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	BH05.1139, CH01.5106
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_2AG0111130, gene-QOZ80_2BG0159870 ... gene-QOZ80_3AG0239220, gene-QOZ80_3AG0239230, gene-QOZ80_3AG0239240, gene-QOZ80_3AG0239250, gene-QOZ80_7AG0554490, gene-QOZ80_7BG0585550, gene-QOZ80_7BG0585560, gene-QOZ80_7BG0585580, gene-QOZ80_8AG0640360
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.3HG0296530.1
Poaceae	Oryza coarctata	2	Oco05G006790, Oco06G006990
Poaceae	Oryza sativa	3	LOC_Os03g12190.1, LOC_Os03g12200.1, LOC_Os03g12210.1
Poaceae	Sporobolus alterniflorus	4	Chr02G013590, Chr05G020180, Chr20G002810, Chr24G001980