HalophFGD

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Basic Information
Locus ID: gene-QOZ80_7AG0553770
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr7A 1708603 1709727 - gene-QOZ80_7AG0553770
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.44 42,609.72 Da 49.95 85.96 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 9 50 6.1E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 4 69 2.22E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 49 1.5E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034583463.1 uncharacterized protein LOC117846415 [Setaria viridis] 0
TrEMBL A0A5J9VYD5 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14981 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_4AG0300920, gene-QOZ80_4BG0331640 ...
gene-QOZ80_7AG0553040, gene-QOZ80_7AG0553770, gene-QOZ80_7AG0553790, gene-QOZ80_7AG0554170, gene-QOZ80_7BG0584820, gene-QOZ80_7BG0584850, gene-QOZ80_7BG0585030, gene-QOZ80_8BG0645700
Poaceae Sporobolus alterniflorus 2 Chr19G006970, Chr27G009930
Poaceae Zoysia japonica 1 nbis-gene-1996
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.