halophFGD

Basic Information

Locus ID: gene-QOZ80_7AG0552230

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: NB-ARC domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7A	316621	320905	-	gene-QOZ80_7AG0552230

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.79	133,713.69 Da	49.85	106.56	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14798	RX-CC_like	10	124	1.39687E-11	IPR038005
Pfam	PF00560	Leucine Rich Repeat	698	719	0.83	IPR001611
Pfam	PF00560	Leucine Rich Repeat	722	744	0.53	IPR001611
Pfam	PF00560	Leucine Rich Repeat	1129	1151	1.3	IPR001611
Pfam	PF13855	Leucine rich repeat	875	923	2.8E-7	IPR001611
Pfam	PF00560	Leucine Rich Repeat	1105	1127	0.21	IPR001611
Pfam	PF18052	Rx N-terminal domain	14	88	1.2E-18	IPR041118
Pfam	PF00931	NB-ARC domain	165	406	4.0E-39	IPR002182
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	143	419	1.08E-52	IPR027417
SUPERFAMILY	SSF52075	Outer arm dynein light chain 1	541	683	8.37E-15	-
SUPERFAMILY	SSF52047	RNI-like	821	1163	2.67E-64	-
SUPERFAMILY	SSF52058	L domain-like	643	922	5.16E-61	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	710	832	8.2E-29	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	996	1200	2.4E-54	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	833	995	2.0E-44	IPR032675
Gene3D	G3DSA:1.10.8.430	-	317	404	1.4E-6	IPR042197
Gene3D	G3DSA:1.10.10.10	-	405	492	8.2E-10	IPR036388
Gene3D	G3DSA:3.40.50.300	-	146	310	3.2E-30	IPR027417
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	642	709	1.7E-15	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	497	641	2.0E-9	IPR032675
Gene3D	G3DSA:1.20.5.4130	-	12	145	2.0E-18	-
SMART	SM00367	LRR_CC_2	605	632	310.0	IPR006553
SMART	SM00367	LRR_CC_2	1127	1154	18.0	IPR006553
SMART	SM00367	LRR_CC_2	1007	1034	390.0	IPR006553
SMART	SM00367	LRR_CC_2	864	894	46.0	IPR006553
SMART	SM00367	LRR_CC_2	959	986	82.0	IPR006553
SMART	SM00367	LRR_CC_2	816	849	100.0	IPR006553
SMART	SM00367	LRR_CC_2	744	771	340.0	IPR006553
SMART	SM00369	LRR_typ_2	959	983	79.0	IPR003591
SMART	SM00369	LRR_typ_2	649	672	9.3	IPR003591
SMART	SM00369	LRR_typ_2	1103	1126	140.0	IPR003591
SMART	SM00369	LRR_typ_2	1007	1031	130.0	IPR003591
SMART	SM00369	LRR_typ_2	864	887	100.0	IPR003591
SMART	SM00369	LRR_typ_2	1127	1151	30.0	IPR003591
SMART	SM00369	LRR_typ_2	696	720	92.0	IPR003591
SMART	SM00369	LRR_typ_2	792	816	320.0	IPR003591
SMART	SM00369	LRR_typ_2	888	911	300.0	IPR003591
SMART	SM00369	LRR_typ_2	605	629	85.0	IPR003591
SMART	SM00367	LRR_CC_2	696	723	190.0	IPR006553
SMART	SM00367	LRR_CC_2	1103	1123	170.0	IPR006553
SMART	SM00367	LRR_CC_2	911	944	160.0	IPR006553
SMART	SM00367	LRR_CC_2	1055	1082	170.0	IPR006553
PRINTS	PR00364	Disease resistance protein signature	185	200	2.8E-19	-
PRINTS	PR00364	Disease resistance protein signature	957	973	2.8E-19	-
PRINTS	PR00364	Disease resistance protein signature	352	366	2.8E-19	-
PRINTS	PR00364	Disease resistance protein signature	254	268	2.8E-19	-
Coils	Coil	Coil	107	134	-	-
Coils	Coil	Coil	39	59	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding) GO:0043531 (ADP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G14470.1	NB-ARC domain-containing disease resistance protein.
RefSeq	XP_034568257.1	putative disease resistance protein RGA1 isoform X1 [Setaria viridis]
Swiss-Prot	Q7XA40	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2
TrEMBL	A0A5J9VXV7	NBS-LRR resistance protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_13933 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg25372, jg25931, jg5627, jg98
Aizoaceae	Mesembryanthemum crystallinum	1	gene_8179
Amaranthaceae	Atriplex hortensis	5	Ah009863, Ah009889, Ah019076, Ah036058, Ah039075
Amaranthaceae	Beta vulgaris	3	BVRB_2g039430, BVRB_2g042620, BVRB_3g055850
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg18650, Sbi_jg43699, Sbi_jg48544, Sbi_jg56270
Amaranthaceae	Salicornia europaea	3	Seu_jg16634, Seu_jg18383, Seu_jg18393
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00001612, GOSA_00012760, GOSA_00020394
Amaranthaceae	Suaeda glauca	5	Sgl45205, Sgl49973, Sgl54057, Sgl59394, Sgl82219
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000008443, gene:ENSEOMG00000021078 ... gene:ENSEOMG00000028941, gene:ENSEOMG00000031977, gene:ENSEOMG00000040147
Amaranthaceae	Chenopodium quinoa	13	CQ.Regalona.r1.2AG0011790, CQ.Regalona.r1.2AG0017450 ... CQ.Regalona.r1.2BG0005740, CQ.Regalona.r1.2BG0005770, CQ.Regalona.r1.2BG0014950, CQ.Regalona.r1.7BG0000380, CQ.Regalona.r1.7BG0016370, CQ.Regalona.r1.7BG0017810, CQ.Regalona.r1.8BG0011440, CQ.Regalona.r1.8BG0019630, CQ.Regalona.r1.9AG0012870, CQ.Regalona.r1.9AG0012990, CQ.Regalona.r1.9AG0020090
Anacardiaceae	Pistacia vera	7	pistato.v30051160, pistato.v30051420, pistato.v30053570 ... pistato.v30079740, pistato.v30231360, pistato.v30248360, pistato.v30248540
Apiaceae	Apium graveolens	1	Ag4G01102
Arecaceae	Cocos nucifera	4	scaffold010649G000010, scaffold013905G000010 ... scaffold020636G000020, scaffold026009G000010
Arecaceae	Phoenix dactylifera	1	gene-LOC113463296
Asteraceae	Flaveria trinervia	1	Ftri7G04826
Casuarinaceae	Casuarina equisetifolia	8	Ceq01G0210, Ceq01G0305, Ceq01G0319, Ceq01G0332, Ceq01G0588 ... Ceq01G0734, Ceq01G0754, Ceq05G1246
Casuarinaceae	Casuarina glauca	12	Cgl01G0168, Cgl01G0273, Cgl01G0275, Cgl01G0279, Cgl01G0282 ... Cgl01G0913, Cgl02G3035, Cgl04G2658, Cgl05G0270, Cgl06G0120, Cgl06G0205, Cgl09G0198
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate01g21220
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-4453
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG03.1911, evm.TU.LG05.1168, evm.TU.LG05.1170 ... evm.TU.LG06.1169, evm.TU.LG06.1185
Plantaginaceae	Plantago ovata	10	Pov_00009514, Pov_00016723, Pov_00016901, Pov_00019932 ... Pov_00020389, Pov_00023077, Pov_00025341, Pov_00034141, Pov_00034143, Pov_00041304
Poaceae	Echinochloa crus-galli	26	AH04.2257, AH04.2258, AH04.2259, AH04.2313, AH06.1, AH08.414 ... AH09.823, AH09.825, AH09.826, BH02.4507, BH04.931, BH04.948, BH05.3486, BH08.423, BH08.937, BH08.943, BH09.817, CH02.1404, CH04.1104, CH04.401, CH04.881, CH08.1067, CH08.1068, CH08.497, CH09.878, CH09.879
Poaceae	Eleusine coracana subsp. coracana	22	gene-QOZ80_1AG0003970, gene-QOZ80_1BG0052390 ... gene-QOZ80_1BG0052410, gene-QOZ80_2AG0114160, gene-QOZ80_3BG0269440, gene-QOZ80_4AG0301510, gene-QOZ80_5AG0391590, gene-QOZ80_5AG0396920, gene-QOZ80_5BG0445450, gene-QOZ80_5BG0445460, gene-QOZ80_7AG0552230, gene-QOZ80_7BG0583230, gene-QOZ80_7BG0583240, gene-QOZ80_7BG0583260, gene-QOZ80_7BG0584230, gene-QOZ80_7BG0588680, gene-QOZ80_8AG0624410, gene-QOZ80_8AG0631400, gene-QOZ80_8AG0631410, gene-QOZ80_9AG0678340, gene-QOZ80_9AG0678350, gene-QOZ80_9AG0684150
Poaceae	Hordeum vulgare	10	HORVU.MOREX.r3.1HG0094070.1, HORVU.MOREX.r3.1HG0094080.1 ... HORVU.MOREX.r3.1HG0094090.1, HORVU.MOREX.r3.2HG0216800.1, HORVU.MOREX.r3.2HG0216840.1.CDS1, HORVU.MOREX.r3.2HG0216880.1, HORVU.MOREX.r3.5HG0420380.1, HORVU.MOREX.r3.6HG0630800.1, HORVU.MOREX.r3.6HG0630920.1, HORVU.MOREX.r3.6HG0633870.1
Poaceae	Lolium multiflorum	16	gene-QYE76_006631, gene-QYE76_015091, gene-QYE76_015099 ... gene-QYE76_015100, gene-QYE76_015101, gene-QYE76_015102, gene-QYE76_015103, gene-QYE76_026485, gene-QYE76_057808, gene-QYE76_058082, gene-QYE76_062972, gene-QYE76_063664, gene-QYE76_071388, gene-QYE76_071389, gene-QYE76_071390, gene-QYE76_071391
Poaceae	Oryza coarctata	7	Oco04G014780, Oco12G013910, Oco15G005230, Oco18G001980 ... Oco18G001990, Oco21G003130, Oco21G003170
Poaceae	Oryza sativa	11	LOC_Os02g38386.1, LOC_Os02g38392.1, LOC_Os05g23255.1 ... LOC_Os08g16450.1, LOC_Os08g16460.1, LOC_Os11g10550.1, LOC_Os11g10570.1, LOC_Os11g10610.1, LOC_Os11g10620.1, LOC_Os11g10760.1, LOC_Os11g10770.1
Poaceae	Paspalum vaginatum	16	gene-BS78_03G310900, gene-BS78_04G184800, gene-BS78_K184500 ... gene-BS78_05G016000, gene-BS78_05G065500, gene-BS78_05G139700, gene-BS78_05G139900, gene-BS78_05G186200, gene-BS78_05G223900, gene-BS78_05G224000, gene-BS78_05G224200, gene-BS78_07G066000, gene-BS78_08G046200, gene-BS78_K184700, gene-BS78_K259900, gene-BS78_K260000
Poaceae	Puccinellia tenuiflora	16	Pt_Chr0500612, Pt_Chr0500614, Pt_Chr0500615, Pt_Chr0500616 ... Pt_Chr0500833, Pt_Chr0505841, Pt_Chr0505843, Pt_Chr0505844, Pt_Chr0505846, Pt_Chr0505850, Pt_Chr0505853, Pt_Chr0505855, Pt_Chr0505856, Pt_Chr0601196, Pt_Chr0603888, Pt_Chr0704763
Poaceae	Sporobolus alterniflorus	20	Chr03G001180, Chr04G014910, Chr04G014920, Chr04G023030 ... Chr08G001250, Chr08G003960, Chr15G009980, Chr15G009990, Chr17G005490, Chr17G010630, Chr19G018750, Chr20G004080, Chr24G002570, Chr25G015980, Chr25G016940, Chr25G016950, Chr25G016960, Chr25G016980, Chr30G015830, Chr31G003490
Poaceae	Thinopyrum elongatum	18	Tel1E01G111200, Tel1E01G111400, Tel1E01G732500 ... Tel2E01G775600, Tel3E01G887900, Tel4E01G619400, Tel5E01G016200, Tel5E01G770900, Tel5E01G771000, Tel6E01G110200, Tel6E01G729100, Tel6E01G729200, Tel6E01G729500, Tel6E01G730600, Tel6E01G731100, Tel7E01G145700, Tel7E01G171800, Tel7E01G171900
Poaceae	Triticum dicoccoides	38	gene_TRIDC1AG063640, gene_TRIDC1AG063650 ... gene_TRIDC1AG063700, gene_TRIDC1AG063710, gene_TRIDC1BG065740, gene_TRIDC1BG065750, gene_TRIDC1BG065760, gene_TRIDC1BG072890, gene_TRIDC1BG072910, gene_TRIDC1BG072940, gene_TRIDC2AG076590, gene_TRIDC2AG082340, gene_TRIDC2AG082360, gene_TRIDC2BG090420, gene_TRIDC2BG090430, gene_TRIDC3BG085760, gene_TRIDC4AG003670, gene_TRIDC4AG003680, gene_TRIDC4AG062210, gene_TRIDC4BG062450, gene_TRIDC4BG062460, gene_TRIDC4BG062480, gene_TRIDC5AG001050, gene_TRIDC5AG010590, gene_TRIDC5AG045970, gene_TRIDC5BG001030, gene_TRIDC5BG001080, gene_TRIDC5BG001090, gene_TRIDC5BG001140, gene_TRIDC5BG009710, gene_TRIDC5BG012370, gene_TRIDC5BG074650, gene_TRIDC6AG058910, gene_TRIDC6BG016590, gene_TRIDC6BG069670, gene_TRIDC6BG069710, gene_TRIDC7AG007600, gene_TRIDC7AG008660
Poaceae	Triticum aestivum	67	TraesCS1A02G433600.1, TraesCS1A02G434000.1 ... TraesCS1B02G416200.1, TraesCS1B02G442200.1, TraesCS1B02G469500.1, TraesCS1B02G469700.1, TraesCS1B02G470000.1, TraesCS1B02G470100.1, TraesCS1B02G470300.1, TraesCS1B02G470400.1.cds1, TraesCS1B02G470500.1, TraesCS1B02G470600.1, TraesCS1D02G419600.1, TraesCS1D02G443300.1, TraesCS1D02G443400.1, TraesCS1D02G443551.1.cds1, TraesCS2B02G161100.1, TraesCS2B02G624900.2, TraesCS2D02G573600.1, TraesCS2D02G573800.1, TraesCS2D02G573900.1, TraesCS3B02G593900.3, TraesCS3D02G531700.1, TraesCS4A02G026300.1, TraesCS4A02G380900.1.cds1, TraesCS4A02G389400.1.cds1, TraesCS4B02G382600.1, TraesCS4D02G103400.1, TraesCS5A02G007200.1.cds1, TraesCS5B02G005700.1, TraesCS5B02G058900.1, TraesCS5B02G059000.1, TraesCS5B02G499300.1.cds1, TraesCS5B02G499400.1.cds1, TraesCS5B02G499500.1, TraesCS5D02G005300.1, TraesCS5D02G005400.1, TraesCS5D02G005416.1.cds1, TraesCS5D02G005600.1, TraesCS5D02G029000.1, TraesCS5D02G499200.1, TraesCS5D02G499300.1, TraesCS5D02G499400.1, TraesCS5D02G499500.1.cds1, TraesCS5D02G499600.1.cds1, TraesCS6A02G400900.1, TraesCS6A02G401000.1, TraesCS6B02G117100.2, TraesCS6B02G440900.1, TraesCS6B02G441200.1, TraesCS6B02G442100.1, TraesCS6B02G442200.1, TraesCS6B02G443000.1, TraesCS6B02G443300.1, TraesCS6D02G384900.1, TraesCS7A02G069600.1, TraesCS7A02G069800.1, TraesCS7D02G065100.1, TraesCS7D02G065200.1, TraesCS7D02G065500.1, TraesCSU02G113800.1, TraesCSU02G132000.1, TraesCSU02G141500.1, TraesCSU02G153000.1, TraesCSU02G153200.1, TraesCSU02G160400.1, TraesCSU02G201600.1
Poaceae	Zea mays	1	Zm00001eb116510_P001
Poaceae	Zoysia japonica	8	nbis-gene-23321, nbis-gene-3245, nbis-gene-32534 ... nbis-gene-37568, nbis-gene-48962, nbis-gene-50430, nbis-gene-54870, nbis-gene-55392
Poaceae	Zoysia macrostachya	6	Zma_g19194, Zma_g19315, Zma_g20769, Zma_g20770, Zma_g5905 ... Zma_g7335
Portulacaceae	Portulaca oleracea	2	evm.TU.LG04.2254, evm.TU.LG17.598
Posidoniaceae	Posidonia oceanica	1	gene.Posoc04g21290
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-27940, nbisL1-mrna-28166
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-10305, nbisL1-mrna-2664
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000023l.130
Rhizophoraceae	Kandelia obovata	3	Maker00008233, Maker00010114, Maker00019105
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-21450, nbisL1-mrna-21453, nbisL1-mrna-21719 ... nbisL1-mrna-22196
Salicaceae	Populus euphratica	9	populus_peu13050, populus_peu13051, populus_peu13065 ... populus_peu13084, populus_peu13085, populus_peu23925, populus_peu24698, populus_peu24712, populus_peu27828
Tamaricaceae	Reaumuria soongarica	4	MSTRG.13832_chr08_+, MSTRG.13848_chr08_-, STRG.24360_chr08_- ... STRG.8738_chr03_+