Basic Information
Locus ID:
gene-QOZ80_6BG0505340
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 74182967 | 74185317 | - | gene-QOZ80_6BG0505340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 76,878.07 Da | 41.11 | 89.63 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 59 | 224 | 1.08525E-34 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 678 | 5.5E-36 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 93 | 203 | 1.26E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 678 | 8.5E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 509 | 2.6E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 690 | 2.6E-42 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 83 | 213 | 1.7E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 428 | 686 | 4.0E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 694 | 31.184563 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 547 | 559 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 296 | - | - |
| Coils | Coil | Coil | 323 | 343 | - | - |
| Coils | Coil | Coil | 366 | 407 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_012700813.1 | U-box domain-containing protein 33 [Setaria italica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2T7DTK3 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G000200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH06.3077, BH06.2876, CH06.990 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0551760, gene-QOZ80_6BG0505340 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G033750 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-9501 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31192 |