Basic Information
Locus ID:
gene-QOZ80_6BG0504570
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 73726231 | 73730059 | - | gene-QOZ80_6BG0504570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 106,890.90 Da | 34.31 | 104.27 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 293 | 308 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 68 | 2.5E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 368 | 388 | 1.6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 714 | 988 | 1.1E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 467 | 522 | 5.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 595 | 1.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 174 | 229 | 2.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 418 | 1.1E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 707 | 988 | 4.99E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 341 | 602 | 1.77E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 142 | 1.6E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 999 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 231 | 338 | 4.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 684 | 790 | 2.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 635 | 6.8E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 230 | 2.7E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 148 | 171 | 190.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 965 | 2.0E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 121 | 147 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 509 | 533 | 1.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 315 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 340 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 244 | 268 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 508 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 989 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_002439033.2 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Sorghum bicolor] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YLS1 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G267700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology