Basic Information
Locus ID:
gene-QOZ80_6BG0502690
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 72568188 | 72569291 | - | gene-QOZ80_6BG0502690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 41,592.47 Da | 52.43 | 93.46 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 9 | 45 | 1.5E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 58 | 6.67E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 315 | 1.73E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 95 | 1.8E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 159 | 324 | 2.3E-5 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 55 | 9.100053 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025791941.1 | uncharacterized protein LOC112873137 [Panicum hallii] | 0 |
| TrEMBL | A0A2T7C9B7 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G383000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH06.2904 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0549130, gene-QOZ80_6BG0502690 |
| Poaceae | Oryza coarctata | 1 | Oco11G015790 |
| Poaceae | Oryza sativa | 5 | LOC_Os06g02054.1, LOC_Os06g43740.1, LOC_Os06g47400.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_10G237500, gene-BS78_10G237800, gene-BS78_K227900 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr11G001780, Chr11G001800, Chr11G001820 |