Basic Information
Locus ID:
gene-QOZ80_6BG0501280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 71568847 | 71581461 | - | gene-QOZ80_6BG0501280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 159,836.44 Da | 44.34 | 84.58 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 450 | 522 | 2.78506E-4 | IPR002083 |
| CDD | cd00121 | MATH | 1132 | 1237 | 2.71159E-7 | IPR002083 |
| CDD | cd00121 | MATH | 17 | 159 | 7.67808E-12 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 550 | 660 | 2.34779E-44 | - |
| CDD | cd00121 | MATH | 744 | 862 | 2.25986E-9 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 177 | 291 | 4.34784E-43 | - |
| Pfam | PF00651 | BTB/POZ domain | 182 | 291 | 1.0E-26 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 890 | 1001 | 2.7E-20 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 552 | 660 | 9.4E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 1279 | 1389 | 1.5E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 879 | 1001 | 1.45E-22 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 164 | 5.72E-18 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 544 | 662 | 1.28E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 1124 | 1239 | 5.07E-10 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 482 | 527 | 5.72E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 173 | 292 | 1.88E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 743 | 865 | 2.78E-15 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 1271 | 1389 | 2.59E-27 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1113 | 1239 | 2.0E-12 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1266 | 1386 | 3.8E-32 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 874 | 997 | 2.4E-29 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 998 | 1046 | 1.7E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 171 | 289 | 1.5E-36 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 290 | 336 | 9.2E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 538 | 657 | 5.3E-36 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 658 | 704 | 3.6E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 445 | 525 | 1.5E-5 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 739 | 865 | 1.9E-15 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 1391 | 1462 | 7.4E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 14 | 162 | 2.0E-13 | IPR008974 |
| SMART | SM00225 | BTB_4 | 191 | 295 | 9.1E-24 | IPR000210 |
| SMART | SM00225 | BTB_4 | 1288 | 1391 | 2.4E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 900 | 1003 | 1.1E-16 | IPR000210 |
| SMART | SM00225 | BTB_4 | 561 | 664 | 7.4E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 258 | 18.575481 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 898 | 963 | 14.645902 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 561 | 622 | 17.562063 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1288 | 1355 | 16.093641 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 158 | 10.521114 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 739 | 862 | 10.418837 | IPR002083 |
| Coils | Coil | Coil | 931 | 951 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_002438817.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9WT20 | BTB domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547650, gene-QOZ80_6BG0501280 |