Basic Information
Locus ID:
gene-QOZ80_6BG0498020
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 69271935 | 69273934 | + | gene-QOZ80_6BG0498020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 66,037.95 Da | 37.72 | 105.50 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 201 | 224 | 0.0024 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 167 | 626 | 3.14E-40 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 38 | 82 | 1.8E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 434 | 629 | 1.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 433 | 6.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 240 | 8.8E-24 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 175 | 200 | 0.12 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 146 | 174 | 460.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 227 | 252 | 0.097 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 519 | 544 | 0.0021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 545 | 569 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 492 | 517 | 3.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 439 | 464 | 4.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 201 | 226 | 3.7E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 333 | 358 | 40.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 253 | 278 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 359 | 384 | 0.051 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 465 | 490 | 0.05 | IPR006553 |
| Coils | Coil | Coil | 627 | 629 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_002437255.2 | EIN3-binding F-box protein 1 [Sorghum bicolor] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology