Basic Information
Locus ID:
gene-QOZ80_6BG0496450
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 68151720 | 68161216 | + | gene-QOZ80_6BG0496450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 93,526.86 Da | 48.51 | 84.03 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 39 | 295 | 5.1E-42 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 500 | 763 | 2.0E-20 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 764 | 4.24E-38 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 322 | 448 | 5.76E-13 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 297 | 5.33E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 569 | 1.3E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 96 | 1.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 319 | 4.9E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 783 | 2.1E-29 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 320 | 452 | 8.4E-14 | IPR013783 |
| SMART | SM00220 | serkin_6 | 37 | 301 | 3.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 301 | 31.566181 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 494 | 770 | 18.746643 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 317 | 448 | 12.592264 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 828 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004981933.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Setaria italica] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 0 | |
| TrEMBL | K4A643 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101765527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene-QOZ80_6BG0496450.