Basic Information
Locus ID:
gene-QOZ80_6BG0496020
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 67739332 | 67742479 | + | gene-QOZ80_6BG0496020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 106,619.96 Da | 36.94 | 99.94 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 679 | 959 | 3.09832E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 487 | 547 | 1.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 276 | 335 | 3.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 203 | 240 | 5.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 75 | 2.3E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 131 | 153 | 0.12 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 675 | 890 | 2.9E-43 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 109 | 565 | 1.1E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 663 | 958 | 2.02E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 319 | 2.0E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 602 | 6.8E-64 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 759 | 971 | 1.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 758 | 1.2E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 534 | 558 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 227 | 251 | 5.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 418 | 442 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 508 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 226 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 129 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 509 | 533 | 23.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 673 | 964 | 6.8E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 959 | 37.50246 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 487 | 509 | 7.519437 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 807 | 819 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 679 | 708 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 230 | 243 | 4.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 534 | 547 | 4.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025811826.1 | receptor-like protein kinase 5 [Panicum hallii] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology