Basic Information
Locus ID:
gene-QOZ80_6BG0492210
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 64959316 | 64960458 | + | gene-QOZ80_6BG0492210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 43,322.13 Da | 35.12 | 86.68 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 218 | 309 | 2.9E-7 | IPR013187 |
| Pfam | PF00646 | F-box domain | 16 | 58 | 1.8E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 124 | 310 | 3.4E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 73 | 8.37E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 60 | 1.1E-9 | - |
| SMART | SM00256 | fbox_2 | 21 | 60 | 7.6E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 113 | 342 | 1.1E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 65 | 10.265807 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_047048154.1 | F-box protein At3g07870-like isoform X6 [Lolium rigidum] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TFG6 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_43446 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology