Basic Information
Locus ID:
gene-QOZ80_6BG0487360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 60929811 | 60933052 | + | gene-QOZ80_6BG0487360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 24,497.55 Da | 56.92 | 50.74 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 23 | 134 | 3.3E-20 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 139 | 187 | 6.7E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 131 | 190 | 2.66E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 132 | 201 | 4.2E-21 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 131 | 4.4E-28 | IPR043151 |
| SMART | SM00439 | BAH_4 | 21 | 135 | 1.4E-37 | IPR001025 |
| SMART | SM00249 | PHD_3 | 139 | 186 | 1.1E-8 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 137 | 188 | 9.196301 | IPR019787 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 135 | 22.15719 | IPR001025 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 140 | 185 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 215 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_002460174.1 | chromatin remodeling protein EBS isoform X2 [Sorghum bicolor] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | C5XC21 | Chromatin remodeling protein EBS-like OS=Sorghum bicolor OX=4558 GN=SORBI_3002G192500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology