halophFGD

Basic Information

Locus ID: gene-QOZ80_6BG0486660

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: VQ motif

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6B	60449523	60450758	+	gene-QOZ80_6BG0486660

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.50	41,379.61 Da	77.70	54.40	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05678	VQ motif	136	163	3.0E-13	IPR008889
MobiDBLite	mobidb-lite	consensus disorder prediction	368	411	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	332	354	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	35	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	73	116	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	17	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	73	146	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G39720.1	VQ motif-containing protein.
RefSeq	XP_025799306.1	mucin-19 [Panicum hallii]
Swiss-Prot	Q9LIE6	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1
TrEMBL	A0A811NIS7	VQ domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS17307 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg10829, jg17022, jg19028, jg20928, jg20929, jg21106, jg6118 ... jg22632, jg31134, jg37473, jg39502
Aizoaceae	Mesembryanthemum crystallinum	4	gene_23314, gene_23709, gene_25087, gene_6189
Amaranthaceae	Atriplex hortensis	4	Ah021725, Ah023946, Ah027043, Ah027320
Amaranthaceae	Beta vulgaris	4	BVRB_1g009390, BVRB_3g061210, BVRB_6g132260, BVRB_6g135250
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg12701, Sbi_jg13508, Sbi_jg19477, Sbi_jg29281 ... Sbi_jg31307, Sbi_jg52379, Sbi_jg53207
Amaranthaceae	Salicornia europaea	4	Seu_jg25596, Seu_jg6442, Seu_jg8690, Seu_jg9475
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00010321, GOSA_00022260
Amaranthaceae	Suaeda glauca	10	Sgl11760, Sgl11922, Sgl17249, Sgl33467, Sgl33503, Sgl33561 ... Sgl38851, Sgl39103, Sgl71840, Sgl75401
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000000297, gene:ENSEOMG00000001281 ... gene:ENSEOMG00000001977, gene:ENSEOMG00000012991, gene:ENSEOMG00000024736, gene:ENSEOMG00000025794, gene:ENSEOMG00000030415, gene:ENSEOMG00000033896, gene:ENSEOMG00000049817
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0011930, CQ.Regalona.r1.1BG0013970 ... CQ.Regalona.r1.3AG0020620, CQ.Regalona.r1.3BG0021440, CQ.Regalona.r1.6AG0021680, CQ.Regalona.r1.6AG0024160, CQ.Regalona.r1.6BG0022880, CQ.Regalona.r1.6BG0025500
Anacardiaceae	Pistacia vera	1	pistato.v30197330
Apiaceae	Apium graveolens	7	Ag11G03407, Ag3G01703, Ag4G02732, Ag7G00471, Ag7G02438 ... Ag9G02517, AgUnG00088
Arecaceae	Cocos nucifera	6	COCNU_03G006800, COCNU_13G002930, contig69545365G000010 ... scaffold001054G000070, scaffold001054G000080, scaffold018973G000050
Arecaceae	Phoenix dactylifera	7	gene-LOC103699546, gene-LOC103701748, gene-LOC103711263 ... gene-LOC103714971, gene-LOC103720247, gene-LOC103721073, gene-LOC120107366
Asparagaceae	Asparagus officinalis	1	AsparagusV1_06.131.V1.1
Asteraceae	Flaveria trinervia	7	Ftri13G24412, Ftri14G34012, Ftri16G06113, Ftri18G07277 ... Ftri18G18234, Ftri1G27924, Ftri2G06114
Brassicaceae	Arabidopsis thaliana	5	AT1G35830.1, AT3G22160.1, AT4G15120.1, AT4G39720.1 ... AT5G65170.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10001873m.g.v1.0, Thhalv10004427m.g.v1.0 ... Thhalv10021568m.g.v1.0, Thhalv10025887m.g.v1.0, Thhalv10026342m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g30500.v2.2, Sp2g28260.v2.2, Sp3g19970.v2.2 ... Sp7g13350.v2.2, Sp7g36170.v2.2
Brassicaceae	Brassica nigra	9	BniB01g040600.2N, BniB03g015000.2N, BniB04g000960.2N ... BniB05g000310.2N, BniB05g021040.2N, BniB06g013480.2N, BniB07g032240.2N, BniB07g043160.2N, BniB07g049480.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G1367, Ceq04G1368
Casuarinaceae	Casuarina glauca	1	Cgl04G1529
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g02750, gene.Cymno09g04870, gene.Cymno11g06700 ... gene.Cymno13g03610
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate04g00360, gene.Thate05g28250, gene.Thate07g04500
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-10166, nbisL1-mrna-1816, nbisL1-mrna-3061 ... nbisL1-mrna-8357
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.1612, evm.TU.LG02.672, evm.TU.LG06.1032 ... evm.TU.LG12.362
Plantaginaceae	Plantago ovata	8	Pov_00003740, Pov_00005197, Pov_00012912, Pov_00014536 ... Pov_00020961, Pov_00031709, Pov_00034554, Pov_00037289
Plumbaginaceae	Limonium bicolor	2	Lb5G27783, Lb5G27858
Poaceae	Echinochloa crus-galli	18	AH01.3439, AH03.1726, AH03.3753, AH06.2600, AH07.518 ... AH08.1333, BH01.3793, BH03.1889, BH03.4032, BH07.1639, BH07.644, BH08.1532, CH01.4046, CH03.2064, CH03.4303, CH06.2686, CH07.522, CH08.1594
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_2AG0103110, gene-QOZ80_2BG0156420 ... gene-QOZ80_3BG0277680, gene-QOZ80_6AG0533610, gene-QOZ80_6AG0547570, gene-QOZ80_6BG0486660, gene-QOZ80_6BG0501200, gene-QOZ80_7AG0577940, gene-QOZ80_7BG0609260, gene-QOZ80_8AG0629620, gene-QOZ80_8BG0658420
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.3HG0222180.1.CDS1 ... HORVU.MOREX.r3.5HG0476460.1.CDS1, HORVU.MOREX.r3.6HG0571070.1.CDS1, HORVU.MOREX.r3.7HG0738010.1.CDS1
Poaceae	Lolium multiflorum	6	gene-QYE76_004823, gene-QYE76_020816, gene-QYE76_036290 ... gene-QYE76_036303, gene-QYE76_039531, gene-QYE76_067559
Poaceae	Oryza coarctata	11	Oco03G003570, Oco04G003520, Oco05G014940, Oco06G015330 ... Oco11G014850, Oco12G014950, Oco14G013860, Oco15G007980, Oco16G007710, Oco17G003520, Oco18G003530
Poaceae	Oryza sativa	6	LOC_Os02g07690.1, LOC_Os03g26990.1, LOC_Os06g45570.1 ... LOC_Os07g43140.1, LOC_Os08g31660.1, LOC_Os09g20460.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G330600, gene-BS78_02G166600 ... gene-BS78_02G356400, gene-BS78_04G053700, gene-BS78_07G130500, gene-BS78_10G220000
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0702410
Poaceae	Sporobolus alterniflorus	18	Chr02G031560, Chr04G012590, Chr05G009400, Chr06G034310 ... Chr07G011990, Chr10G011260, Chr10G019870, Chr11G002770, Chr11G011020, Chr14G012950, Chr15G025570, Chr16G013830, Chr17G013270, Chr19G001900, Chr20G006510, Chr21G012030, Chr27G015300, Chr29G006160
Poaceae	Thinopyrum elongatum	3	Tel3E01G072000, Tel5E01G327300, Tel6E01G319700
Poaceae	Triticum dicoccoides	6	gene_TRIDC2BG078030, gene_TRIDC5AG031560 ... gene_TRIDC5BG033260, gene_TRIDC6AG021870, gene_TRIDC6BG027640, gene_TRIDC7BG060600
Poaceae	Triticum aestivum	11	TraesCS3A02G044200.1.cds1, TraesCS3D02G036600.1 ... TraesCS5A02G189700.1.cds1, TraesCS5B02G193500.1.cds1, TraesCS5D02G201200.1.cds1, TraesCS6A02G156200.1.cds1, TraesCS6B02G184400.1.cds1, TraesCS6D02G146200.1.cds1, TraesCS7A02G478700.1.cds1, TraesCS7B02G381400.1.cds1, TraesCS7D02G466100.1.cds1
Poaceae	Zea mays	9	Zm00001eb084880_P001, Zm00001eb098700_P001 ... Zm00001eb178900_P001, Zm00001eb233250_P001, Zm00001eb274360_P001, Zm00001eb311250_P001, Zm00001eb327890_P001, Zm00001eb389870_P001, Zm00001eb392380_P001
Poaceae	Zoysia japonica	12	nbis-gene-11999, nbis-gene-16904, nbis-gene-19915 ... nbis-gene-29855, nbis-gene-30989, nbis-gene-327, nbis-gene-33641, nbis-gene-40519, nbis-gene-45028, nbis-gene-52172, nbis-gene-55130, nbis-gene-9800
Poaceae	Zoysia macrostachya	10	Zma_g1095, Zma_g12265, Zma_g15023, Zma_g22966, Zma_g24050 ... Zma_g30965, Zma_g32498, Zma_g33225, Zma_g3524, Zma_g6890
Portulacaceae	Portulaca oleracea	7	evm.TU.LG01.239, evm.TU.LG05.653, evm.TU.LG06.672 ... evm.TU.LG11.111, evm.TU.LG18.414, evm.TU.LG25.666, evm.TU.LG26.622
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g29360, gene.Posoc04g15220, gene.Posoc10g08670
Rhizophoraceae	Bruguiera sexangula	8	evm.TU.Scaffold_10_RagTag.1015, evm.TU.Scaffold_8_RagTag.282 ... evm.TU.Scaffold_3_RagTag.1053, evm.TU.Scaffold_4_RagTag.1512, evm.TU.Scaffold_6_RagTag.1648, evm.TU.Scaffold_7_RagTag.1006, evm.TU.Scaffold_7_RagTag.1513, evm.TU.Scaffold_8_RagTag.724
Rhizophoraceae	Carallia pectinifolia	9	nbisL1-mrna-10012, nbisL1-mrna-13476, nbisL1-mrna-17521 ... nbisL1-mrna-18840, nbisL1-mrna-19974, nbisL1-mrna-20323, nbisL1-mrna-26232, nbisL1-mrna-945, nbisL1-mrna-9517
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-1023, nbisL1-mrna-13585, nbisL1-mrna-14975 ... nbisL1-mrna-158, nbisL1-mrna-16161, nbisL1-mrna-16497, nbisL1-mrna-17598, nbisL1-mrna-1977
Rhizophoraceae	Ceriops zippeliana	8	nbisL1-mrna-12118, nbisL1-mrna-13447, nbisL1-mrna-17905 ... nbisL1-mrna-18271, nbisL1-mrna-2322, nbisL1-mrna-4342, nbisL1-mrna-6831, nbisL1-mrna-9249
Rhizophoraceae	Kandelia candel	8	add.evm.TU.utg000002l.298, add.evm.TU.utg000002l.65 ... add.evm.TU.utg000004l.98, add.evm.TU.utg000008l.321, add.evm.TU.utg000011l.396, add.evm.TU.utg000018l.204, add.evm.TU.utg000018l.323, add.evm.TU.utg000019l.267
Rhizophoraceae	Kandelia obovata	6	Maker00000310, Maker00001886, Maker00003127, Maker00003706 ... Maker00008110, Maker00010528
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-15113, nbisL1-mrna-17583, nbisL1-mrna-17893 ... nbisL1-mrna-17994, nbisL1-mrna-18219, nbisL1-mrna-19200, nbisL1-mrna-20026, nbisL1-mrna-22773
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-11327, nbisL1-mrna-12199, nbisL1-mrna-1747 ... nbisL1-mrna-20332, nbisL1-mrna-4425, nbisL1-mrna-7690, nbisL1-mrna-9936
Salicaceae	Populus euphratica	10	populus_peu02993, populus_peu10447, populus_peu10531 ... populus_peu13782, populus_peu14624, populus_peu22941, populus_peu26432, populus_peu32292, populus_peu33869, populus_peu37340
Solanaceae	Lycium barbarum	5	gene-LOC132601814, gene-LOC132614646, gene-LOC132618583 ... gene-LOC132624429, gene-LOC132627493
Solanaceae	Solanum chilense	5	SOLCI001049900, SOLCI001788000, SOLCI002873100 ... SOLCI004375100, SOLCI005066000
Solanaceae	Solanum pennellii	5	gene-LOC107006034, gene-LOC107009869, gene-LOC107016098 ... gene-LOC107016346, gene-LOC107025397
Tamaricaceae	Reaumuria soongarica	3	STRG.16610_chr06_+, STRG.22171_chr09_-, STRG.6002_chr02_-
Tamaricaceae	Tamarix chinensis	3	TC03G2772, TC07G1973, TC09G0014
Zosteraceae	Zostera marina	3	Zosma03g22450.v3.1, Zosma03g33850.v3.1, Zosma05g20080.v3.1