Basic Information
Locus ID:
gene-QOZ80_6BG0486540
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
regulation of response to stimulus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 60360989 | 60362269 | - | gene-QOZ80_6BG0486540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 47,776.01 Da | 51.22 | 82.16 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 31 | 67 | 1.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 85 | 9.16E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 69 | 4.5E-8 | - |
| SMART | SM00256 | fbox_2 | 29 | 70 | 0.0024 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039847784.1 | uncharacterized protein LOC120707073 [Panicum virgatum] | 0 |
| TrEMBL | A0A0A9AAY2 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH02.1933, CH02.1946 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_4BG0352940, gene-QOZ80_6AG0533510 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_008233, gene-QYE76_008236, gene-QYE76_008837 ... |
| Poaceae | Oryza coarctata | 2 | Oco01G010670, Oco01G011070 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g28520.1, LOC_Os01g32640.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G371000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500709, Pt_Chr0704898 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G000930, Chr25G013870, Chr25G013880, Chr27G016500 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G069100, Tel1E01G099600, Tel1E01G744700 |
| Poaceae | Triticum aestivum | 8 | TraesCS1A02G439200.1, TraesCS1B02G055300.1 ... |