Basic Information
Locus ID:
gene-QOZ80_6BG0483990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 57718932 | 57721703 | + | gene-QOZ80_6BG0483990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 62,846.06 Da | 50.05 | 80.82 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 472 | 531 | 6.80768E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 87 | 349 | 1.15032E-117 | - |
| Pfam | PF13202 | EF hand | 399 | 420 | 8.4E-5 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 88 | 350 | 7.3E-65 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 471 | 531 | 1.2E-12 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 378 | 546 | 1.42E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 367 | 3.51E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 358 | 5.8E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 359 | 533 | 1.6E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 177 | 1.7E-20 | - |
| SMART | SM00220 | serkin_6 | 88 | 350 | 1.7E-85 | IPR000719 |
| SMART | SM00054 | efh_1 | 505 | 533 | 0.0039 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 5.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 397 | 425 | 0.055 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 7.8 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 14.931837 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 14.318138 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 350 | 44.739071 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 501 | 536 | 13.007053 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 212 | 224 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 514 | 526 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 94 | 117 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_004957332.1 | calcium-dependent protein kinase 22 [Setaria italica] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9TC25 | Calcium-dependent protein kinase 24 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42368 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology