Basic Information
Locus ID:
gene-QOZ80_6BG0483630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 57421940 | 57427687 | - | gene-QOZ80_6BG0483630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 145,139.80 Da | 49.64 | 91.12 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 22 | 89 | 2.56566E-7 | IPR038005 |
| Pfam | PF00931 | NB-ARC domain | 189 | 428 | 4.2E-39 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 18 | 101 | 5.0E-12 | IPR041118 |
| Pfam | PF03106 | WRKY DNA -binding domain | 1172 | 1231 | 1.4E-24 | IPR003657 |
| Pfam | PF02365 | No apical meristem (NAM) protein | 1010 | 1113 | 3.2E-11 | IPR003441 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 1166 | 1232 | 5.23E-24 | IPR036576 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 173 | 446 | 4.68E-50 | IPR027417 |
| SUPERFAMILY | SSF101941 | NAC domain | 1010 | 1139 | 1.7E-22 | IPR036093 |
| SUPERFAMILY | SSF52058 | L domain-like | 542 | 888 | 4.25E-21 | - |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 1007 | 1143 | 1.4E-18 | IPR036093 |
| Gene3D | G3DSA:3.40.50.300 | - | 166 | 334 | 1.9E-25 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 520 | 913 | 1.4E-16 | IPR032675 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 1157 | 1226 | 2.6E-25 | IPR036576 |
| Gene3D | G3DSA:1.10.8.430 | - | 346 | 437 | 8.2E-14 | IPR042197 |
| Gene3D | G3DSA:1.20.5.4130 | - | 14 | 123 | 2.7E-15 | - |
| SMART | SM00774 | WRKY_cls | 1171 | 1233 | 5.5E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 1166 | 1230 | 22.251297 | IPR003657 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 687 | 708 | 8.035384 | IPR001611 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 995 | 1140 | 21.522949 | IPR003441 |
| PRINTS | PR00364 | Disease resistance protein signature | 212 | 227 | 9.4E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 284 | 298 | 9.4E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 381 | 395 | 9.4E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 683 | 699 | 9.4E-12 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_002462195.1 | uncharacterized protein LOC8071916 [Sorghum bicolor] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | C5X9Q6 | WRKY domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G168300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology