Basic Information
Locus ID:
gene-QOZ80_6BG0482870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
heat shock factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 56850459 | 56852041 | + | gene-QOZ80_6BG0482870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 42,758.77 Da | 62.31 | 62.45 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 37 | 126 | 1.0E-32 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 34 | 126 | 2.72E-35 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 30 | 127 | 7.1E-38 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 33 | 126 | 1.5E-59 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 76 | 100 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 37 | 60 | 1.1E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 75 | 87 | 1.1E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 88 | 100 | 1.1E-20 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| Coils | Coil | Coil | 202 | 229 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11660.1 | winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_025802933.1 | heat stress transcription factor B-2c-like [Panicum hallii] | 0 |
| Q6Z9C8 | Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EUW8 | HSF_DOMAIN domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G328800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology