Basic Information
Locus ID:
gene-QOZ80_6BG0482630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine-rich repeats, outliers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 56614622 | 56616394 | + | gene-QOZ80_6BG0482630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 54,368.34 Da | 45.82 | 108.03 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 80 | 475 | 1.43E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 268 | 6.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 480 | 3.7E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 285 | 315 | 570.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 113 | 138 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 449 | 474 | 41.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 420 | 445 | 0.42 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 225 | 270.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 87 | 112 | 0.99 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 341 | 366 | 71.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 173 | 198 | 75.0 | IPR006553 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021310368.1 | EIN3-binding F-box protein 2-like [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9TFQ2 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_43645 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.375.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g10740 |
| Poaceae | Echinochloa crus-galli | 1 | BH03.2836 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6BG0482630 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G013880, Chr10G013900, Chr10G013910, Chr11G008410 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG059180 |
| Poaceae | Zea mays | 2 | Zm00001eb241470_P001, Zm00001eb319400_P001 |