Basic Information
Locus ID:
gene-QOZ80_6BG0482460
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 56338286 | 56339782 | - | gene-QOZ80_6BG0482460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 53,572.16 Da | 62.76 | 71.49 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 86 | 290 | 3.5E-15 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| Coils | Coil | Coil | 386 | 409 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051196811.1 | F-box protein CPR1-like [Lolium perenne] | 0 |
| TrEMBL | A0A811NNK9 | DUF1618 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS16418 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009102 |
| Poaceae | Echinochloa crus-galli | 2 | BH03.2855, CH03.3061 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6BG0482460 |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_006814, gene-QYE76_006815, gene-QYE76_006817 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G310700.1.cds1 |