Basic Information
Locus ID:
gene-QOZ80_6BG0481050
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 54855258 | 54859676 | - | gene-QOZ80_6BG0481050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 94,765.67 Da | 44.46 | 75.75 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 665 | 700 | 3.38451E-5 | - |
| CDD | cd00054 | EGF_CA | 314 | 348 | 2.11157E-5 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 314 | 344 | 7.6E-6 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 380 | 442 | 6.5E-14 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 665 | 696 | 4.2E-6 | IPR001881 |
| Pfam | PF00069 | Protein kinase domain | 811 | 863 | 5.4E-10 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 88 | 1.4E-12 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 313 | 348 | 1.51E-6 | - |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 664 | 701 | 8.75E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 772 | 863 | 4.13E-21 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 268 | 356 | 2.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 806 | 865 | 2.3E-19 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 616 | 711 | 2.6E-12 | - |
| SMART | SM00181 | egf_5 | 668 | 708 | 1.7 | IPR000742 |
| SMART | SM00181 | egf_5 | 271 | 313 | 0.046 | IPR000742 |
| SMART | SM00181 | egf_5 | 317 | 356 | 0.89 | IPR000742 |
| SMART | SM00179 | egfca_6 | 314 | 356 | 7.9E-6 | IPR001881 |
| SMART | SM00179 | egfca_6 | 665 | 708 | 2.1E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 865 | 16.287329 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 330 | 341 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 314 | 339 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 794 | 819 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 665 | 691 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_034569270.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria viridis] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9W684 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0525250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G008760 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG078570 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ... |
| Poaceae | Zoysia macrostachya | 3 | Zma_g29880, Zma_g32067, Zma_g32068 |