Basic Information
Locus ID:
gene-QOZ80_6BG0478710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 51622983 | 51626803 | - | gene-QOZ80_6BG0478710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 72,092.93 Da | 67.67 | 64.15 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 578 | 618 | 4.55611E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 576 | 623 | 8.8E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 578 | 624 | 3.04E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 559 | 630 | 2.0E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 579 | 618 | 10.910707 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| Coils | Coil | Coil | 508 | 528 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | NP_001145411.1 | uncharacterized LOC100278771 isoform 1 [Zea mays] | 0 |
| TrEMBL | A0A5J9THB1 | RING-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_44171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology