Basic Information
Locus ID:
gene-QOZ80_6BG0478460
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 51258108 | 51259409 | + | gene-QOZ80_6BG0478460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 44,599.06 Da | 46.54 | 98.11 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 3.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 130 | 176 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 103 | 394 | 5.65E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 212 | 4.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 399 | 1.5E-27 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_004965417.1 | probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Setaria italica] | 0 |
| TrEMBL | K3XX40 | LRRNT_2 domain-containing protein OS=Setaria italica OX=4555 GN=101783631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology