halophFGD

Basic Information

Locus ID: gene-QOZ80_6BG0470220

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6B	13038322	13038933	-	gene-QOZ80_6BG0470220

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.48	23,018.00 Da	35.48	74.83	-0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	46	175	1.08674E-29	IPR002083
Pfam	PF00917	MATH domain	64	175	4.5E-8	IPR002083
SUPERFAMILY	SSF49599	TRAF domain-like	43	179	1.64E-33	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	44	178	2.4E-31	IPR008974
SMART	SM00061	math_3	50	157	5.3E-4	IPR002083
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	45	174	22.999031	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G20370.2	-
RefSeq	XP_025876950.1	BTB/POZ and MATH domain-containing protein 5-like [Oryza sativa Japonica Group]
TrEMBL	A0A811NSY7	MATH domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS20832 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	9	AH04.1998, BH01.2320, BH01.2327, BH01.2373, CH01.2421 ... CH04.2225, CH04.2361, CH07.478, Contig328.34
Poaceae	Eleusine coracana subsp. coracana	53	gene-QOZ80_2AG0108720, gene-QOZ80_2AG0111760 ... gene-QOZ80_2AG0124640, gene-QOZ80_2AG0124650, gene-QOZ80_2AG0124730, gene-QOZ80_2AG0124750, gene-QOZ80_2AG0124760, gene-QOZ80_2AG0124770, gene-QOZ80_2AG0124780, gene-QOZ80_2AG0124800, gene-QOZ80_2AG0124820, gene-QOZ80_2AG0124830, gene-QOZ80_2AG0124840, gene-QOZ80_2AG0124850, gene-QOZ80_2AG0125150, gene-QOZ80_2AG0125240, gene-QOZ80_2BG0162210, gene-QOZ80_2BG0180250, gene-QOZ80_2BG0180320, gene-QOZ80_2BG0180350, gene-QOZ80_2BG0180360, gene-QOZ80_2BG0180370, gene-QOZ80_2BG0180390, gene-QOZ80_2BG0180400, gene-QOZ80_2BG0180410, gene-QOZ80_2BG0180420, gene-QOZ80_2BG0180440, gene-QOZ80_2BG0180450, gene-QOZ80_2BG0180950, gene-QOZ80_3AG0208930, gene-QOZ80_3AG0208940, gene-QOZ80_3AG0237990, gene-QOZ80_3BG0254100, gene-QOZ80_3BG0280430, gene-QOZ80_4BG0330370, gene-QOZ80_6BG0470150, gene-QOZ80_6BG0470180, gene-QOZ80_6BG0470220, gene-QOZ80_8AG0629330, gene-QOZ80_8AG0629340, gene-QOZ80_8AG0629350, gene-QOZ80_8BG0657770, gene-QOZ80_8BG0657790, gene-QOZ80_8BG0657810, gene-QOZ80_9AG0689660, gene-QOZ80_9AG0689700, gene-QOZ80_9AG0689750, gene-QOZ80_9AG0689770, gene-QOZ80_9AG0692100, gene-QOZ80_9BG0714390, gene-QOZ80_9BG0714400, gene-QOZ80_9BG0714530, gene-QOZ80_9BG0714570
Poaceae	Hordeum vulgare	24	HORVU.MOREX.r3.1HG0040600.1.CDS1 ... HORVU.MOREX.r3.1HG0088550.1.CDS1, HORVU.MOREX.r3.3HG0241340.1.CDS1, HORVU.MOREX.r3.3HG0276420.1.CDS1, HORVU.MOREX.r3.3HG0298600.1.CDS1, HORVU.MOREX.r3.3HG0298640.1.CDS1, HORVU.MOREX.r3.3HG0319540.1.CDS1, HORVU.MOREX.r3.4HG0406030.1.CDS1, HORVU.MOREX.r3.4HG0407760.1.CDS1, HORVU.MOREX.r3.4HG0407800.1.CDS1, HORVU.MOREX.r3.4HG0414440.1.CDS1, HORVU.MOREX.r3.4HG0417220.1.CDS1, HORVU.MOREX.r3.5HG0478140.1.CDS1, HORVU.MOREX.r3.5HG0509590.1.CDS1, HORVU.MOREX.r3.5HG0509610.1.CDS1, HORVU.MOREX.r3.5HG0509630.1.CDS1, HORVU.MOREX.r3.5HG0509700.1.CDS1, HORVU.MOREX.r3.5HG0509710.1.CDS1, HORVU.MOREX.r3.6HG0625920.1.CDS1, HORVU.MOREX.r3.6HG0625930.1.CDS1, HORVU.MOREX.r3.6HG0625970.1.CDS1, HORVU.MOREX.r3.6HG0625980.1.CDS1, HORVU.MOREX.r3.7HG0643680.1.CDS1, HORVU.MOREX.r3.7HG0723180.1.CDS1
Poaceae	Lolium multiflorum	57	gene-QYE76_004888, gene-QYE76_006531, gene-QYE76_009381 ... gene-QYE76_009571, gene-QYE76_010164, gene-QYE76_010166, gene-QYE76_010170, gene-QYE76_010171, gene-QYE76_013921, gene-QYE76_016297, gene-QYE76_016298, gene-QYE76_020083, gene-QYE76_020909, gene-QYE76_023901, gene-QYE76_023902, gene-QYE76_023909, gene-QYE76_023911, gene-QYE76_026473, gene-QYE76_026504, gene-QYE76_026506, gene-QYE76_026507, gene-QYE76_026516, gene-QYE76_026520, gene-QYE76_026521, gene-QYE76_033732, gene-QYE76_033733, gene-QYE76_033771, gene-QYE76_033772, gene-QYE76_035236, gene-QYE76_035397, gene-QYE76_035466, gene-QYE76_036482, gene-QYE76_041217, gene-QYE76_041219, gene-QYE76_043929, gene-QYE76_048095, gene-QYE76_048096, gene-QYE76_051035, gene-QYE76_060416, gene-QYE76_061939, gene-QYE76_061940, gene-QYE76_061941, gene-QYE76_061942, gene-QYE76_061954, gene-QYE76_061956, gene-QYE76_062036, gene-QYE76_062040, gene-QYE76_062041, gene-QYE76_062042, gene-QYE76_062044, gene-QYE76_062045, gene-QYE76_063360, gene-QYE76_065858, gene-QYE76_065918, gene-QYE76_065919, gene-QYE76_065920, gene-QYE76_066062
Poaceae	Oryza coarctata	18	Oco07G006120, Oco07G006130, Oco08G006070, Oco15G011860 ... Oco19G004590, Oco19G004600, Oco19G004610, Oco19G004620, Oco19G004710, Oco19G006480, Oco20G004510, Oco20G004520, Oco20G006480, Oco21G002360, Oco21G008760, Oco22G009790, Oco22G009800, Oco22G010030
Poaceae	Oryza sativa	47	LOC_Os02g52316.1, LOC_Os04g35310.1, LOC_Os04g35340.1 ... LOC_Os04g35370.1, LOC_Os10g28760.1, LOC_Os10g28770.1, LOC_Os10g28780.1, LOC_Os10g28790.1, LOC_Os10g28810.1, LOC_Os10g28820.1, LOC_Os10g28840.1, LOC_Os10g28860.1, LOC_Os10g28975.1, LOC_Os10g29020.1, LOC_Os10g29050.1, LOC_Os10g29100.1, LOC_Os10g29110.1, LOC_Os10g29120.1, LOC_Os10g29150.1, LOC_Os10g29180.1, LOC_Os10g29190.1, LOC_Os10g29220.1, LOC_Os10g29230.1, LOC_Os10g29260.1, LOC_Os10g29290.1, LOC_Os10g29310.1, LOC_Os10g29320.1, LOC_Os10g29330.1, LOC_Os10g29340.1, LOC_Os10g29370.1, LOC_Os10g29380.1, LOC_Os10g29390.1, LOC_Os10g29440.1, LOC_Os10g29740.1, LOC_Os10g29750.1, LOC_Os10g29790.1, LOC_Os10g29810.1, LOC_Os10g29830.1, LOC_Os10g29840.1, LOC_Os10g29850.1, LOC_Os10g29920.1, LOC_Os10g29950.1, LOC_Os10g30040.1, LOC_Os10g30360.1, LOC_Os11g40490.1, LOC_Os11g40680.1, LOC_Os11g41250.1
Poaceae	Paspalum vaginatum	35	gene-BS78_01G166000, gene-BS78_01G231700, gene-BS78_K168100 ... gene-BS78_01G231800, gene-BS78_01G232000, gene-BS78_01G232100, gene-BS78_01G232200, gene-BS78_01G232500, gene-BS78_01G232600, gene-BS78_04G261300, gene-BS78_04G261400, gene-BS78_05G042800, gene-BS78_05G214300, gene-BS78_05G214400, gene-BS78_05G214700, gene-BS78_05G214800, gene-BS78_05G214900, gene-BS78_05G215000, gene-BS78_05G216400, gene-BS78_05G216600, gene-BS78_05G216800, gene-BS78_05G216900, gene-BS78_05G217000, gene-BS78_05G217200, gene-BS78_06G011900, gene-BS78_06G103800, gene-BS78_09G083000, gene-BS78_K168200, gene-BS78_K168300, gene-BS78_K168600, gene-BS78_K168700, gene-BS78_K168900, gene-BS78_K190100, gene-BS78_K222500, gene-BS78_K222600
Poaceae	Puccinellia tenuiflora	13	Pt_Chr0103299, Pt_Chr0107102, Pt_Chr0107631, Pt_Chr0206187 ... Pt_Chr0206217, Pt_Chr0400051, Pt_Chr0500066, Pt_Chr0600313, Pt_Chr0601246, Pt_Chr0601330, Pt_Chr0601331, Pt_Chr0702377, Pt_Chr0702378
Poaceae	Sporobolus alterniflorus	25	Chr06G014060, Chr06G014070, Chr07G014720, Chr07G015320 ... Chr09G009290, Chr09G009320, Chr09G009340, Chr09G009350, Chr09G009360, Chr09G009370, Chr09G009550, Chr12G005230, Chr13G015690, Chr13G015700, Chr13G015710, Chr15G014850, Chr15G014870, Chr16G013640, Chr17G013120, Chr20G006800, Chr25G007940, Chr25G011060, Chr25G017070, Chr27G009080, Chr29G006480
Poaceae	Thinopyrum elongatum	28	Tel1E01G480700, Tel1E01G492300, Tel1E01G584000 ... Tel3E01G009000, Tel3E01G216600, Tel3E01G216700, Tel3E01G216800, Tel3E01G612600, Tel3E01G781200, Tel3E01G890100, Tel4E01G503100, Tel4E01G517500, Tel5E01G607400, Tel5E01G607900, Tel5E01G608200, Tel5E01G608300, Tel5E01G608400, Tel5E01G608600, Tel5E01G608800, Tel5E01G608900, Tel5E01G609000, Tel6E01G655000, Tel6E01G655300, Tel6E01G655400, Tel6E01G655500, Tel7E01G666400, Tel7E01G779200, Tel7E01G779300
Poaceae	Triticum dicoccoides	36	gene_TRIDC1AG022050, gene_TRIDC1AG045220 ... gene_TRIDC1BG026440, gene_TRIDC1BG051120, gene_TRIDC1BG051130, gene_TRIDC1BG067720, gene_TRIDC3AG016110, gene_TRIDC3AG068550, gene_TRIDC3AG068560, gene_TRIDC3AG068570, gene_TRIDC3BG020910, gene_TRIDC3BG020920, gene_TRIDC3BG020930, gene_TRIDC3BG061660, gene_TRIDC3BG071780, gene_TRIDC3BG077550, gene_TRIDC3BG077560, gene_TRIDC3BG077570, gene_TRIDC4AG055510, gene_TRIDC5AG055790, gene_TRIDC5AG055840, gene_TRIDC5AG055850, gene_TRIDC5BG059830, gene_TRIDC5BG059850, gene_TRIDC5BG059870, gene_TRIDC5BG059880, gene_TRIDC6AG054940, gene_TRIDC6AG054960, gene_TRIDC6AG054970, gene_TRIDC6BG064310, gene_TRIDC6BG064320, gene_TRIDC6BG064330, gene_TRIDC6BG064350, gene_TRIDC7AG054770, gene_TRIDC7BG047500, gene_TRIDC7BG058040
Poaceae	Triticum aestivum	99	TraesCS1A02G144900.1, TraesCS1A02G303900.1.cds1 ... TraesCS1A02G359600.1.cds1, TraesCS1B02G162200.1.cds1, TraesCS1B02G306600.1.cds1, TraesCS1B02G306700.1, TraesCS1B02G314300.1, TraesCS1B02G314400.1.cds1, TraesCS1B02G375700.1, TraesCS1B02G375800.1.cds1, TraesCS1B02G412000.1.cds1, TraesCS1B02G428500.1.cds1, TraesCS1D02G096100.1.cds1, TraesCS1D02G293700.1.cds1, TraesCS1D02G303400.1, TraesCS1D02G407900.1.cds1, TraesCS2B02G542800.1.cds1, TraesCS3A02G128700.1.cds1, TraesCS3A02G384800.1, TraesCS3A02G384900.1.cds1, TraesCS3A02G385000.1.cds1, TraesCS3A02G385100.1.cds1, TraesCS3A02G486600.1.cds1, TraesCS3A02G486700.1.cds1, TraesCS3A02G486800.1, TraesCS3B02G147700.1.cds1, TraesCS3B02G147800.1.cds1, TraesCS3B02G416600.1, TraesCS3B02G416700.1.cds1, TraesCS3B02G416800.1.cds1, TraesCS3B02G416900.1.cds1, TraesCS3B02G417000.1.cds1, TraesCS3B02G417100.1.cds1, TraesCS3B02G417200.1.cds1, TraesCS3B02G417300.1.cds1, TraesCS3B02G489300.1.cds1, TraesCS3B02G489400.1.cds1, TraesCS3B02G534600.1.cds1, TraesCS3B02G534700.1.cds1, TraesCS3B02G534800.1.cds1, TraesCS3D02G103600.1, TraesCS3D02G129600.1, TraesCS3D02G377600.1.cds1, TraesCS3D02G377700.1.cds1, TraesCS3D02G377800.1.cds1, TraesCS3D02G377900.1.cds1, TraesCS3D02G378000.1.cds1, TraesCS3D02G378100.1.cds1, TraesCS3D02G482000.1.cds1, TraesCS3D02G482100.1.cds1, TraesCS3D02G482200.1, TraesCS4A02G411800.1.cds1, TraesCS4A02G425600.1.cds1, TraesCS4A02G425700.1.cds1, TraesCS4B02G312000.1, TraesCS4D02G300300.1.cds1, TraesCS4D02G309600.1.cds1, TraesCS5A02G047600.1.cds1, TraesCS5A02G381300.1.cds1, TraesCS5A02G381500.1.cds1, TraesCS5A02G382000.1, TraesCS5A02G382200.1.cds1, TraesCS5A02G476000.1, TraesCS5B02G385500.1.cds1, TraesCS5B02G385600.1.cds1, TraesCS5B02G385700.1.cds1, TraesCS5B02G385800.2.cds1, TraesCS5B02G385900.1.cds1, TraesCS5B02G386100.1.cds1, TraesCS5B02G386200.1.cds1, TraesCS5D02G391300.1.cds1, TraesCS5D02G391400.1, TraesCS5D02G391500.1.cds1, TraesCS6A02G014200.1, TraesCS6A02G367400.1.cds1, TraesCS6A02G367700.1.cds1, TraesCS6A02G367900.1.cds1, TraesCS6B02G402700.1.cds1, TraesCS6B02G403600.1, TraesCS6B02G403700.1.cds1, TraesCS6D02G350400.1.cds1, TraesCS6D02G350500.1.cds1, TraesCS6D02G350700.1.cds1, TraesCS6D02G350900.1.cds1, TraesCS6D02G351000.2.cds1, TraesCS6D02G351100.1.cds1, TraesCS6D02G351200.1.cds1, TraesCS7A02G212600.1.cds1, TraesCS7A02G337600.1.cds1, TraesCS7A02G394200.1.cds1, TraesCS7B02G119400.1.cds1, TraesCS7B02G296200.1.cds1, TraesCS7B02G361600.1, TraesCS7D02G214400.1.cds1, TraesCS7D02G389600.1.cds1, TraesCS7D02G448300.1.cds1, TraesCS7D02G448400.1, TraesCSU02G055300.1.cds1, TraesCSU02G085200.1.cds1
Poaceae	Zea mays	6	Zm00001eb047620_P001, Zm00001eb047910_P001 ... Zm00001eb049070_P001, Zm00001eb050730_P001, Zm00001eb065610_P001, Zm00001eb222950_P001
Poaceae	Zoysia japonica	17	nbis-gene-27987, nbis-gene-27992, nbis-gene-27994 ... nbis-gene-27997, nbis-gene-27999, nbis-gene-47992, nbis-gene-47993, nbis-gene-47996, nbis-gene-48012, nbis-gene-48015, nbis-gene-48016, nbis-gene-5110, nbis-gene-57370, nbis-gene-58268, nbis-gene-58939, nbis-gene-58951, nbis-gene-59124
Poaceae	Zoysia macrostachya	8	Zma_g13261, Zma_g13262, Zma_g13263, Zma_g13264, Zma_g16055 ... Zma_g16056, Zma_g16075, Zma_g24029