Basic Information
Locus ID:
gene-QOZ80_6BG0470080
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 12695723 | 12696238 | - | gene-QOZ80_6BG0470080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.72 | 18,301.49 Da | 24.33 | 100.47 | 0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 170 | 2.02457E-56 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 28 | 170 | 1.3E-43 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 170 | 1.3E-43 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 27 | 171 | 3.1E-37 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02420.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044419824.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] | 0 |
| Q6H7D2 | L-type lectin-domain containing receptor kinase SIT1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT1 PE=1 SV=1 | 0 | |
| TrEMBL | K3Y1A5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6BG0470080 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_023094, gene-QYE76_023097 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G119100.1 |