Basic Information
Locus ID:
gene-QOZ80_6BG0459140
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 1082938 | 1086599 | + | gene-QOZ80_6BG0459140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 43,256.02 Da | 46.32 | 91.37 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00023 | Ankyrin repeat | 195 | 222 | 3.4E-4 | IPR002110 |
| Pfam | PF00023 | Ankyrin repeat | 46 | 75 | 1.1E-6 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 82 | 179 | 2.6E-18 | IPR020683 |
| SUPERFAMILY | SSF57850 | RING/U-box | 295 | 355 | 4.82E-7 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 16 | 248 | 1.8E-48 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 110 | 251 | 4.1E-31 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 285 | 366 | 3.3E-8 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 10 | 109 | 2.6E-23 | IPR036770 |
| SMART | SM00248 | ANK_2a | 150 | 179 | 1.3E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 44 | 73 | 3.0E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 194 | 223 | 3.5E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 77 | 106 | 0.15 | IPR002110 |
| SMART | SM00248 | ANK_2a | 111 | 141 | 0.033 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 44 | 76 | 14.372149 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 194 | 220 | 11.585487 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 194 | 226 | 12.18193 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 77 | 109 | 8.86989 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 150 | 177 | 11.001797 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 44 | 75 | 13.469215 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 301 | 350 | 9.641949 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 150 | 182 | 11.75457 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 111 | 132 | 8.985412 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 111 | 132 | 9.00344 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 316 | 325 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 210 | 224 | 8.3E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 151 | 166 | 8.3E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 403 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_025813714.1 | probable E3 ubiquitin-protein ligase XBOS36 [Panicum hallii] | 0 |
| Q4JHE0 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TPX7 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46564 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology