Basic Information
Locus ID:
gene-QOZ80_6BG0457760
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 244469 | 246175 | - | gene-QOZ80_6BG0457760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 56,971.67 Da | 38.26 | 87.71 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01466 | vWA_C3HC4_type | 82 | 236 | 9.29662E-56 | - |
| Pfam | PF00092 | von Willebrand factor type A domain | 83 | 240 | 5.1E-20 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 409 | 475 | 1.2E-15 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 79 | 250 | 5.56E-30 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 83 | 251 | 7.3E-39 | IPR036465 |
| SMART | SM00327 | VWA_4 | 81 | 250 | 1.6E-21 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 83 | 249 | 17.261845 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| Coils | Coil | Coil | 386 | 406 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_010235116.1 | uncharacterized protein LOC100846008 [Brachypodium distachyon] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | I1I6Z1 | VWFA domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100846008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology