Basic Information
Locus ID:
gene-QOZ80_6BG0457520
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6B | 97714 | 107185 | + | gene-QOZ80_6BG0457520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 109,068.28 Da | 59.76 | 78.33 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 902 | 963 | 0.00263683 | - |
| Pfam | PF16135 | Tify domain binding domain | 586 | 636 | 5.1E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 405 | 460 | 2.9E-15 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 895 | 992 | 6.64E-9 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 734 | 792 | 1.77E-8 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 644 | 697 | 1.67E-11 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 888 | 996 | 1.3E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 638 | 727 | 4.8E-13 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 736 | 797 | 7.0E-12 | IPR013083 |
| SMART | SM00249 | PHD_3 | 738 | 795 | 0.0043 | IPR001965 |
| SMART | SM00249 | PHD_3 | 652 | 692 | 4.3E-6 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 842 | 1012 | 10.111875 | IPR000182 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 739 | 794 | - | IPR019786 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 653 | 691 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 64 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_004966585.1 | uncharacterized protein LOC101772696 [Setaria italica] | 0 |
| TrEMBL | A0A5J9SK28 | N-acetyltransferase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology