Basic Information
Locus ID:
gene-QOZ80_6AG0551760
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 59514298 | 59516776 | - | gene-QOZ80_6AG0551760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 76,548.91 Da | 42.01 | 90.84 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 56 | 222 | 1.19351E-33 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 674 | 6.4E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 674 | 3.24E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 686 | 5.0E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 505 | 2.2E-18 | - |
| SMART | SM00220 | serkin_6 | 424 | 682 | 1.5E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 690 | 31.368305 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 543 | 555 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 40 | - | - |
| Coils | Coil | Coil | 312 | 339 | - | - |
| Coils | Coil | Coil | 362 | 382 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_012700813.1 | U-box domain-containing protein 33 [Setaria italica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2T7DTK3 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G000200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH06.3077, BH06.2876, CH06.990 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0551760, gene-QOZ80_6BG0505340 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G033750 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-9501 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31192 |