Basic Information
Locus ID:
gene-QOZ80_6AG0551000
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 59066732 | 59070627 | - | gene-QOZ80_6AG0551000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 109,821.35 Da | 34.65 | 104.22 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 737 | 1011 | 1.2E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 90 | 5.8E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 559 | 618 | 2.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 232 | 1.7E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 318 | 340 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 391 | 411 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 365 | 654 | 8.5E-50 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 100 | 427 | 3.77E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 730 | 1011 | 5.26E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 707 | 813 | 2.9E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 256 | 4.3E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 166 | 7.9E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 814 | 1022 | 1.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 658 | 1.5E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 257 | 362 | 4.6E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 171 | 193 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 169 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 556 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 531 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 339 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 365 | 389 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 243 | 49.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 736 | 988 | 2.0E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 292 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 736 | 1012 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_004966471.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Setaria italica] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | K3XV02 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101763793 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology