Basic Information
Locus ID:
gene-QOZ80_6AG0547940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 57249721 | 57250059 | - | gene-QOZ80_6AG0547940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 12,634.12 Da | 50.55 | 98.21 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 56 | 112 | 3.2E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 23 | 112 | 9.14E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 53 | 112 | 3.2E-22 | - |
| SMART | SM00213 | ubq_7 | 54 | 112 | 2.9E-8 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 54 | 112 | 18.12723 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 64 | 84 | 1.9E-8 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 85 | 105 | 1.9E-8 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_027913562.1 | ubiquitin-40S ribosomal protein S27a-like [Vigna unguiculata] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453NEY3 | Polyubiquitin OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547940, gene-QOZ80_6BG0501620 |