Basic Information
Locus ID:
gene-QOZ80_6AG0547700
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 57079132 | 57080187 | - | gene-QOZ80_6AG0547700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 39,413.91 Da | 46.29 | 83.36 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 18 | 141 | 4.03319E-11 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 168 | 281 | 1.00008E-51 | - |
| Pfam | PF00651 | BTB/POZ domain | 170 | 281 | 3.1E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 159 | 281 | 3.14E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 145 | 3.92E-17 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 145 | 3.3E-12 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 284 | 351 | 1.9E-19 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 278 | 2.9E-36 | IPR011333 |
| SMART | SM00225 | BTB_4 | 180 | 284 | 6.9E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 180 | 247 | 17.624109 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039844400.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TBW0 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41893 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology