Basic Information
Locus ID:
gene-QOZ80_6AG0547670
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 57063270 | 57068504 | - | gene-QOZ80_6AG0547670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 66,222.31 Da | 43.07 | 88.95 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 331 | 396 | 0.00324638 | IPR002083 |
| CDD | cd00121 | MATH | 19 | 147 | 1.1011E-10 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 177 | 286 | 3.4E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 425 | 534 | 1.3E-20 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 415 | 536 | 3.26E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 151 | 6.21E-17 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 169 | 287 | 4.71E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 326 | 402 | 1.11E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 167 | 283 | 1.4E-34 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 413 | 533 | 5.5E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 150 | 2.7E-14 | IPR008974 |
| Gene3D | G3DSA:6.10.250.3030 | - | 284 | 329 | 1.6E-12 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 538 | 602 | 4.8E-19 | - |
| SMART | SM00225 | BTB_4 | 434 | 538 | 1.9E-17 | IPR000210 |
| SMART | SM00225 | BTB_4 | 186 | 289 | 9.0E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 434 | 495 | 15.121588 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 186 | 253 | 17.603428 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 146 | 9.319348 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025882225.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LEH0 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547670, gene-QOZ80_6BG0501290 |