Basic Information
Locus ID:
gene-QOZ80_6AG0547660
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 57059879 | 57061478 | - | gene-QOZ80_6AG0547660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 40,813.24 Da | 38.45 | 83.62 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 162 | 3.51299E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 187 | 297 | 5.0E-27 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 179 | 298 | 2.45E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 166 | 7.52E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 165 | 5.1E-15 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 302 | 369 | 9.0E-22 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 176 | 296 | 1.5E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 196 | 301 | 4.4E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 161 | 11.339339 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 263 | 18.058432 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039807890.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6S1G1 | BTB domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM09G21040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology