Basic Information
Locus ID:
gene-QOZ80_6AG0547650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 57052376 | 57058295 | - | gene-QOZ80_6AG0547650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 118,590.73 Da | 43.49 | 85.95 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 151 | 2.13114E-13 | IPR002083 |
| CDD | cd00121 | MATH | 355 | 467 | 1.17211E-8 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 180 | 290 | 2.33279E-44 | - |
| Pfam | PF00651 | BTB/POZ domain | 182 | 290 | 2.2E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 902 | 1012 | 1.7E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 500 | 608 | 1.4E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 789 | 903 | 8.67E-8 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 174 | 292 | 7.07E-30 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 484 | 607 | 3.73E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 156 | 2.13E-16 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 894 | 1012 | 1.93E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 354 | 470 | 9.32E-14 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 294 | 357 | 4.4E-20 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 1014 | 1082 | 2.5E-17 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 358 | 470 | 2.0E-12 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 788 | 908 | 1.3E-6 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 154 | 3.3E-15 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 168 | 288 | 8.0E-37 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 909 | 1013 | 8.9E-29 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 605 | 652 | 8.0E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 479 | 604 | 3.5E-29 | IPR011333 |
| SMART | SM00225 | BTB_4 | 911 | 1014 | 5.1E-24 | IPR000210 |
| SMART | SM00225 | BTB_4 | 191 | 294 | 1.6E-25 | IPR000210 |
| SMART | SM00225 | BTB_4 | 507 | 609 | 2.2E-17 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 252 | 17.810247 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 507 | 569 | 14.418399 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 911 | 978 | 17.169106 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 150 | 11.211492 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025882225.1 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LEH0 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547650, gene-QOZ80_6BG0501280 |