Basic Information
Locus ID:
gene-QOZ80_6AG0544470
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 55055799 | 55057807 | + | gene-QOZ80_6AG0544470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 66,369.32 Da | 39.24 | 105.16 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 204 | 227 | 0.0023 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 629 | 5.18E-41 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 85 | 1.59E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 244 | 437 | 8.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 494 | 625 | 8.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 438 | 493 | 2.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 134 | 243 | 2.3E-24 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 442 | 467 | 3.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 495 | 520 | 3.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 468 | 493 | 0.05 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 204 | 229 | 7.7E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 336 | 361 | 93.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 548 | 572 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 256 | 281 | 8.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 149 | 177 | 260.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 522 | 547 | 0.0021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 230 | 255 | 0.073 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 362 | 387 | 0.27 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 178 | 203 | 0.08 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_004965933.1 | EIN3-binding F-box protein 1 [Setaria italica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology