Basic Information
Locus ID:
gene-QOZ80_6AG0542830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 53789238 | 53792327 | + | gene-QOZ80_6AG0542830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 110,900.51 Da | 39.66 | 95.93 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 695 | 972 | 2.12348E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 1.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 290 | 350 | 3.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 903 | 2.3E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 157 | 3.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 503 | 562 | 5.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 291 | 589 | 4.94E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 971 | 2.6E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 377 | 5.1E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 988 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 144 | 9.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 672 | 772 | 3.6E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 381 | 1.4E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 382 | 624 | 8.0E-49 | IPR032675 |
| SMART | SM00220 | serkin_6 | 689 | 977 | 1.8E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 524 | 548 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 140.0 | IPR003591 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 6.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 972 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 722 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 549 | 562 | 4.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1029 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 994 | 1029 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0TBH0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG061843 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology