Basic Information
Locus ID:
gene-QOZ80_6AG0542820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 53777349 | 53780487 | + | gene-QOZ80_6AG0542820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 109,737.78 Da | 38.96 | 99.94 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 703 | 982 | 3.26487E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 9.5E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 359 | 1.2E-6 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 104 | 152 | 1.5E-6 | IPR025875 |
| Pfam | PF13516 | Leucine Rich repeat | 534 | 548 | 0.56 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 699 | 917 | 9.4E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 561 | 581 | 0.4 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 981 | 2.56E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 299 | 603 | 8.63E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 388 | 1.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 488 | 621 | 5.7E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 783 | 994 | 1.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 298 | 4.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 680 | 782 | 1.5E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 196 | 2.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 398 | 487 | 6.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 397 | 8.4E-23 | IPR032675 |
| SMART | SM00220 | serkin_6 | 697 | 987 | 2.1E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 442 | 466 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 7.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 557 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 128 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 981 | 37.940617 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 732 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 7.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 7.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025811826.1 | receptor-like protein kinase 5 [Panicum hallii] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811S9G2 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS63325 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology