halophFGD

Basic Information

Locus ID: gene-QOZ80_6AG0539000

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6A	51261040	51262710	-	gene-QOZ80_6AG0539000

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.48	37,611.35 Da	51.06	82.95	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	166	252	5.73569E-23	-
Pfam	PF00651	BTB/POZ domain	159	267	1.9E-20	IPR000210
SUPERFAMILY	SSF54695	POZ domain	148	267	8.89E-24	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	144	298	1.3E-36	IPR011333
SMART	SM00225	BTB_4	167	269	3.6E-18	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	167	230	16.259098	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G55760.1	BTB/POZ domain-containing protein.
RefSeq	XP_044960719.1	BTB/POZ domain-containing protein At1g55760 [Hordeum vulgare subsp. vulgare]
Swiss-Prot	Q680K8	BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1
TrEMBL	A0A1E5WJ22	BTB/POZ domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001623 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH03.2335, BH03.2467, BH03.2468, CH03.2658
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_6AG0539000