Basic Information
Locus ID:
gene-QOZ80_6AG0538990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 51255931 | 51256455 | - | gene-QOZ80_6AG0538990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 19,803.43 Da | 59.85 | 94.19 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 107 | 150 | 0.00119817 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 8 | 89 | 1.93655E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 6 | 104 | 7.1E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 2 | 104 | 4.71E-19 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 106 | 7.0E-21 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 107 | 171 | 2.6E-6 | - |
| SMART | SM00225 | BTB_4 | 8 | 106 | 6.7E-12 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 8 | 69 | 14.00476 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55760.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_034579684.1 | BTB/POZ domain-containing protein At1g55760-like isoform X2 [Setaria viridis] | 0 |
| Q680K8 | BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6VXU4 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G257400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0538990, gene-QOZ80_6BG0492320 |