Basic Information
Locus ID:
gene-QOZ80_6AG0538890
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 51151990 | 51153258 | + | gene-QOZ80_6AG0538890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 48,585.20 Da | 31.24 | 87.06 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 61 | 6.7E-9 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 217 | 309 | 1.1E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 73 | 2.49E-13 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 117 | 309 | 5.1E-7 | IPR011043 |
| Gene3D | G3DSA:2.120.10.80 | - | 122 | 419 | 1.0E-5 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 60 | 3.3E-9 | - |
| SMART | SM00256 | fbox_2 | 21 | 61 | 1.2E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 117 | 343 | 2.3E-26 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 65 | 10.10684 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044389203.1 | F-box protein At3g07870-like [Triticum aestivum] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835BPL6 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_037873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology