Basic Information
Locus ID:
gene-QOZ80_6AG0538870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 51130889 | 51132133 | + | gene-QOZ80_6AG0538870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 47,956.71 Da | 52.33 | 86.67 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 58 | 4.7E-11 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 219 | 330 | 3.1E-6 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 88 | 1.19E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 67 | 1.3E-7 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 9.0E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 114 | 351 | 1.2E-27 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 59 | 8.543671 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17480.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_008668114.1 | F-box domain containing protein isoform X2 [Zea mays] | 0 |
| Q9LUP9 | Putative F-box protein At3g17480 OS=Arabidopsis thaliana OX=3702 GN=At3g17480 PE=4 SV=1 | 0 | |
| TrEMBL | A0A811N462 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12648 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology